Canopy closure estimation in a temperate forest using airborne LiDAR and LANDSAT ETM+ data

Aims　Forest canopy closure is one of the essential factors in forest survey, and plays an important role in forest ecosystem management. It is of great significance to study how to apply LiDAR (light detection and ranging) data efficiently in remote sensing estimation of forest canopy closure. LiDAR can be used to obtain data fast and accurately and therefore be used as training and validation data to estimate forest canopy closure in large spatial scale. It can compensate for the insufficiency (e.g. labor-intensive, time-consuming) of conventional ground survey, and provide foundations to forest inventory.Methods　In this study, we estimated canopy closure of a temperate forest in Genhe forest of Da Hinggan Ling area, Nei Mongol, China, using LiDAR and LANDSAT ETM+ data. Firstly, we calculated the canopy closure from ALS (Airborne Laser Scanning) high density point cloud data. Then, the estimated canopy closure from ALS data was used as training and validation data to modeling and inversion from eight vegetation indices computed from LANDSAT ETM+ data. Three approaches, multi-variable stepwise regression (MSR), random forest (RF) and Cubist, were developed and tested to estimate canopy closure from these vegetation indices, respectively.Important findings The validation results showed that the Cubist model yielded the highest accuracy compared to the other two models (determination coefficient (R²) = 0.722, root mean square error (RMSE) = 0.126, relative root mean square error (rRMSE) = 0.209, estimation accuracy (EA) = 79.883%). The combination of LiDAR data and LANDSAT ETM+ showed great potential to accurately estimate the canopy closure of the temperate forest. However, the model prediction capability needs to be further improved in order to be applied in larger spatial scale. More independent variables from other remotely sensed datasets, e.g. topographic data, texture information from high-resolution imagery, should be added into the model. These variables can help to reduce the influence of optical image, vegetation indices, terrain and shadow and so on. Moreover, the accuracy of the LiDAR-derived canopy closure needs to be further validated in future studies.     

Non‐parametric habitat models with automatic interactions

Questions: Can a statistical model be designed to represent more directly the nature of organismal response to multiple interacting factors? Can multiplicative kernel smoothers be used for this purpose? What advantages does this approach have over more traditional habitat modelling methods? Methods: Non‐parametric multiplicative regression (NPMR) was developed from the premises that: the response variable has a minimum of zero and a physiologically‐determined maximum, species respond simultaneously to multiple ecological factors, the response to any one factor is conditioned by the values of other factors, and that if any of the factors is intolerable then the response is zero. Key features of NPMR are interactive effects of predictors, no need to specify an overall model form in advance, and built‐in controls on overfitting. The effectiveness of the method is demonstrated with simulated and real data sets. Results: Empirical and theoretical relationships of species response to multiple interacting predictors can be represented effectively by multiplicative kernel smoothers. NPMR allows us to abandon simplistic assumptions about overall model form, while embracing the ecological truism that habitat factors interact.     

缙云山生境片断化对常绿阔叶林生物多样性的影响

采用Simpson、Shannon-Wiener和Hill多样性指数以及逐步多元回归分析方法,在缙云山进行了植物群落调查、小气候观测和土壤肥力的测定以及各变量之间关系的分析。结果表明:片断常绿阔叶林物种多样性指数比连续常绿阔叶林低,不同生活型的表现不同;各片断阔叶林斑块边缘均存在明显的小气候边缘效应。随着斑块面积的减小,各斑块的ΔTa、林缘及林内ΔTs、林缘和林内ΔRH、林缘和林内Vmax、林缘和林内ΔPAR(正午)均呈增大的趋势。各斑块的小气候边缘效应,以最大斑块波及林内的深度最浅(约至林内15m)、最小斑块波及林内的深度最深(约至林内25m);常绿阔叶林物种多样性受林内外有效光合辐射(正午)差、气温日较差、土壤含水量、土壤有机质含量和土壤有效钾等因素的影响。     

Variation partitioning for range expansion of an introduced species: the common waxbill Estrilda astrild in Portugal

The common waxbill Estrilda astrild was first introduced to Portugal, from Africa, in 1964, from where it has spread to much of the country and to Spain. We modelled the expansion of this species on a 20×20-km UTM grid in 4-year periods from 1964 to 1999. Colonisation process on a grid was modelled as a function of several biophysical and spatio-temporal variables through the fitting of several multiple logistic equations. Variation partitioning confirmed the importance of the spatial-temporal component, explaining 33% of the total variation, followed by the combined effects of both environmental and spatial-temporal variables (around 25%). Only 11% of the total variation can be attributed strictly to the considered environmental factors.     

GIS支持下考洲洋养殖水域浮游植物数量的时空分布及其与营养盐的相关性研究

在GIS和统计分析软件SPSS的支持下,利用数据插值、相关性分析和回归分析等方法,研究了枯水期和丰水期考洲洋养殖水域浮游植物数量的分布趋势及其与海水营养盐的相关关系。结果表明,枯水期浮游植物数量的分布较为均匀,其密集区分布于吉隆河口及其附近水域;而丰水期的数量变化幅度较大,密集分布区出现在湾口至盐洲岛北部水域,呈现出从湾西北部至湾口水域逐渐增加的分布趋势。两次调查相比,丰水期浮游植物的数量明显高于枯水期。相关性研究结果表明,调查期间浮游植物数量与无机氮和无机磷的相关性均不显著,但与活性硅酸盐呈显著相关,在枯水期两者之间呈显著正相关,而在丰水期则刚好相反,两者之间呈显著负相关。     

Fauna habitat modelling and mapping: A review and case study in the Lower Hunter Central Coast region of NSW

Abstract Habitat models are now broadly used in conservation planning on public lands. If implemented correctly, habitat modelling is a transparent and repeatable technique for describing and mapping biodiversity values, and its application in peri‐urban and agricultural landscape planning is likely to expand rapidly. Conservation planning in such landscapes must be robust to the scrutiny that arises when biodiversity constraints are placed on developers and private landholders. A standardized modelling and model evaluation method based on widely accepted techniques will improve the robustness of conservation plans. We review current habitat modelling and model evaluation methods and provide a habitat modelling case study in the New South Wales central coast region that we hope will serve as a methodological template for conservation planners. We make recommendations on modelling methods that are appropriate when presence‐absence and presence‐only survey data are available and provide methodological details and a website with data and training material for modellers. Our aim is to provide practical guidelines that preserve methodological rigour and result in defendable habitat models and maps. The case study was undertaken in a rapidly developing area with substantial biodiversity values under urbanization pressure. Habitat maps for seven priority fauna species were developed using logistic regression models of species‐habitat relationships and a bootstrapping methodology was used to evaluate model predictions. The modelled species were the koala, tiger quoll, squirrel glider, yellow‐bellied glider, masked owl, powerful owl and sooty owl. Models ranked sites adequately in terms of habitat suitability and provided predictions of sufficient reliability for the purpose of identifying preliminary conservation priority areas. However, they are subject to multiple uncertainties and should not be viewed as a completely accurate representation of the distribution of species habitat. We recommend the use of model prediction in an adaptive framework whereby models are iteratively updated and refined as new data become available.     

Spatial Controls of Pre–Euro-American Wind and Fire Disturbance in Northern Wisconsin (USA) Forest Landscapes

We elucidate spatial controls of wind and fire disturbance across northern Wisconsin (USA), where climatic and topographic gradients are not strong, using data from the original US Public Land Survey (PLS) notes. These records contain information on the location and extent of heavy windthrows and stand-replacing fires prior to Euro-American settlement. The spatial patterns of windthrow and fire were spatially clustered at all scales in this historical environment, with stronger associations at local than regional scales. Logistic regression shows environmental variables to have a strong influence on this pattern. In the case of heavy windthrow, environmental drivers of disturbance pattern are fairly consistent across the region. The effects of climate and vegetation are predominant at all scales, but effects are often indirect, with strong interactions between them. Interactions between these two drivers and soil characteristics are also sometimes present. In contrast, models of stand-replacing fire show simple and direct control within and across fire-prone landscapes of historical northern Wisconsin, with climate and physiography as the main factors explaining the distribution of fire disturbance. This simple and direct control is lost at the regional scale, where climate, physiographic, soil, and vegetation variables, along with interactions between them, are significant factors. Contrary to other regions, the topographic effects are generally not important in predicting either wind or fire disturbance. Our work suggests that, in landscapes that lack strong environmental patterning, climate maintains its role as a primary driver of these natural disturbances, but topography is replaced by interactions and feedbacks with other forms of environmental heterogeneity.     

In vitro nemato-toxic potential of some leaf extracts on Juvenile mortality of Meloidogyne incognita race-3

Abstract

Aqueous leaf extracts of four commonly growing weeds namely Ageratum conyzoides, Elephantopus scaber, Lantana camara and Xanthium strumarium were used to evaluate their nematicidal activity on second stage juvenile of Meloidogyne incognita race-3. The juveniles were exposed to various concentration of leaf extract namely 250, 500, 1000 and 2000?ppm for 12, 24 and 48?h, respectively. All leaf extracts showed the nematicidal property in concentration and time-dependent manner. The maximum juvenile mortality was recorded in E. scaber throughout the incubation period followed by X. strumarium, L. camara and A. conyzoides. The regression and correlation of regression revealed the best concentration-dependent effect of aqueous leaf extracts on nematode mortality in E. scaber (R²?=?.751) followed by X. strumarium (R²?=?.749), A. conyzoides (R²?=?.687) and L. camara (R²?=?.756). Aqueous leaves extracts of these aforementioned weeds showed nematicidal properties, therefore, may be used as a key component of integrated disease management programme.